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PVX_085225 ribosomal protein L21e, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5476019, updated on 5-Sep-2024

Summary

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Gene symbol
PVX_085225
Gene description
ribosomal protein L21e, putative
Locus tag
PVX_085225
See related
PlasmoDB:PVX_085225; VEuPathDB:PVX_085225
Gene type
protein coding
RNA name
ribosomal protein L21e, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
Orthologs
Plasmodium falciparum all
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Genomic context

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See PVX_085225 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
1
Sequence:
Chromosome: 13; NC_009918.1 (1025752..1026658)

Chromosome 13 - NC_009918.1Genomic Context describing neighboring genes Neighboring gene Probable protein arginine N-methyltransferase, putative Neighboring gene basic transcription factor 3b, putative Neighboring gene hypothetical protein, conserved Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009918.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosomal protein L21e, putative
XP_001616711.1
  • encoded by transcript PVX_085225A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009918.1 Reference assembly

    Range
    1025752..1026658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001616661.1 → XP_001616711.1  ribosomal protein L21e, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001616711.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9SM18, A0A0J9T7G7, A0A0J9TNT3, A0A0J9UYI0, A0A1G4HJ14, A5K0Y7
    Conserved Domains (1) summary
    PTZ00189
    Location:2 → 161
    PTZ00189; 60S ribosomal protein L21; Provisional
Nucleotide Protein
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