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LOC548020 ribonucleoside-diphosphate reductase large subunit [ Glycine max (soybean) ]

Gene ID: 548020, updated on 3-Feb-2025

Summary

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Gene symbol
LOC548020
Gene description
ribonucleoside-diphosphate reductase large subunit
Locus tag
GLYMA_05G186900v4
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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Genomic context

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See LOC548020 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2025_01 current Glycine_max_v4.0 (GCF_000004515.6) 5 NC_038241.2 (37342692..37347798, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 5 NC_038241.1 (37334419..37339525, complement)

Chromosome 5 - NC_038241.2Genomic Context describing neighboring genes Neighboring gene 26S proteasome non-ATPase regulatory subunit 12 homolog A Neighboring gene ethylene-responsive transcription factor ABR1 Neighboring gene RNA-binding protein 39 Neighboring gene cellulose synthase A catalytic subunit 6 [UDP-forming]

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonucleoside-diphosphate reductase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonucleoside-diphosphate reductase large subunit
Names
ribonucleotide reductase large subunit A
NP_001237526.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001250597.1 → NP_001237526.1  ribonucleoside-diphosphate reductase large subunit

    Status: PROVISIONAL

    Source sequence(s)
    AF118784
    UniProtKB/TrEMBL
    A0A0R0KB38, Q8GZU9
    Conserved Domains (1) summary
    PLN02437
    Location:1 → 809
    PLN02437; ribonucleoside--diphosphate reductase large subunit

RefSeqs of Annotated Genomes: GCF_000004515.6-RS_2025_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038241.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    37342692..37347798 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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