pm20d1.1 peptidase M20 domain containing 1, tandem duplicate 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: pm20d1.1provided by ZNC
Official Full Name: peptidase M20 domain containing 1, tandem duplicate 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-051120-102
See related: Ensembl:ENSDARG00000037551 AllianceGenome:ZFIN:ZDB-GENE-051120-102
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:123113
Summary: Predicted to enable hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides. Predicted to be involved in several processes, including adaptive thermogenesis; amide catabolic process; and energy homeostasis. Predicted to act upstream of or within proteolysis. Predicted to be located in extracellular space. Orthologous to human PM20D1 (peptidase M20 domain containing 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs: all
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Genomic context

Location:: chromosome: 23

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	23	NC_007134.7 (18020928..18030399, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	23	NC_007134.6 (18094585..18104056, complement)

Chromosome 23 - NC_007134.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables aminoacylase activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IBA Inferred from Biological aspect of Ancestor more info
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	ISS Inferred from Sequence or Structural Similarity more info
enables lyase activity	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables peptidase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in adaptive thermogenesis	ISS Inferred from Sequence or Structural Similarity more info
involved_in amide biosynthetic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in amide biosynthetic process	ISS Inferred from Sequence or Structural Similarity more info
involved_in amide catabolic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in amide catabolic process	ISS Inferred from Sequence or Structural Similarity more info
involved_in amino acid metabolic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in amino acid metabolic process	ISS Inferred from Sequence or Structural Similarity more info
involved_in energy homeostasis	ISS Inferred from Sequence or Structural Similarity more info
involved_in fatty acid metabolic process	IEA Inferred from Electronic Annotation more info
involved_in lipid metabolic process	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within proteolysis	IEA Inferred from Electronic Annotation more info
involved_in respiratory electron transport chain	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in extracellular region	IEA Inferred from Electronic Annotation more info
located_in extracellular space	ISS Inferred from Sequence or Structural Similarity more info

General protein information

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Preferred Names: N-fatty-acyl-amino acid synthase/hydrolase PM20D1.1

NP_001032448.2

EC 3.5.1.114

EC 3.5.1.14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001037371.2 → NP_001032448.2 N-fatty-acyl-amino acid synthase/hydrolase PM20D1.1 precursor

Status: VALIDATED

Source sequence(s)

CR352232

UniProtKB/Swiss-Prot

Q32LT9

Related

ENSDARP00000114349.1, ENSDART00000136967.3