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wnt8-2 protein Wnt-8a ORF2 [ Danio rerio (zebrafish) ]

Gene ID: 553976, updated on 12-Sep-2024

Summary

Gene symbol
wnt8-2
Gene description
protein Wnt-8a ORF2
See related
Ensembl:ENSDARG00000105311
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
This gene encodes a member of the conserved Wnt family of secreted signaling proteins. The encoded protein is essential for correct patterning of the mesoderm and neural ectoderm during gastrulation. In zebrafish, two similar, functional proteins are co-transcribed from a single bicistronic mRNA. [provided by RefSeq, Apr 2013]
Orthologs
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Genomic context

See wnt8-2 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (34490445..34497724)
105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (34150131..34157410)

Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137487530 Neighboring gene thymosin beta 2 Neighboring gene wingless-type MMTV integration site family, member 8a Neighboring gene uncharacterized LOC137487602 Neighboring gene zgc:194246 Neighboring gene lymphocyte cytosolic protein 2b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001020801.2NP_001018637.2  protein Wnt-8a ORF2 precursor

    See identical proteins and their annotated locations for NP_001018637.2

    Status: REVIEWED

    Source sequence(s)
    BX248097, BX927327
    UniProtKB/TrEMBL
    Q90YL8
    Related
    ENSDART00000141058.2
    Conserved Domains (1) summary
    smart00097
    Location:23336
    WNT1; found in Wnt-1

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007125.7 Reference GRCz11 Primary Assembly

    Range
    34490445..34497724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394919.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    1..589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395317.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    1..589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)