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irgq2 immunity-related GTPase family, q2 [ Danio rerio (zebrafish) ]

Gene ID: 556650, updated on 4-Jan-2025

Summary

Official Symbol
irgq2provided by ZNC
Official Full Name
immunity-related GTPase family, q2provided by ZNC
Primary source
ZFIN:ZDB-GENE-051212-7
See related
Ensembl:ENSDARG00000068657 AllianceGenome:ZFIN:ZDB-GENE-051212-7
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable GTP binding activity. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See irgq2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (38150542..38154591, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (38248957..38253006, complement)

Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene sialoadhesin-like Neighboring gene si:dkey-24p1.1 Neighboring gene si:dkey-24p1.7 Neighboring gene cholinergic receptor, nicotinic, alpha 10a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
immunity-related GTPase family, q2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001044810.2NP_001038275.1  immunity-related GTPase family, q2

    See identical proteins and their annotated locations for NP_001038275.1

    Status: PROVISIONAL

    Source sequence(s)
    BC162755
    UniProtKB/TrEMBL
    B3DHG4, Q1LY91
    Related
    ENSDARP00000090165.3, ENSDART00000099392.4
    Conserved Domains (1) summary
    cl21455
    Location:37221
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007126.7 Reference GRCz11 Primary Assembly

    Range
    38150542..38154591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)