U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cyp27a2 cytochrome P450 family 27 subfamily A member 2 [ Danio rerio (zebrafish) ]

Gene ID: 558239, updated on 4-Jan-2025

Summary

Official Symbol
cyp27a2provided by ZNC
Official Full Name
cytochrome P450 family 27 subfamily A member 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-120215-110
See related
Ensembl:ENSDARG00000073764 AllianceGenome:ZFIN:ZDB-GENE-120215-110
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:ch211-113j14.1
Summary
Predicted to enable cholesterol 26-hydroxylase activity and vitamin D3 25-hydroxylase activity. Predicted to be involved in calcitriol biosynthetic process from calciol and cholesterol metabolic process. Predicted to be active in mitochondrion. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See cyp27a2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (9467602..9529120, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (9235345..9293632, complement)

Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene kalirin RhoGEF kinase b Neighboring gene serine/threonine-protein kinase pim-1 Neighboring gene mitogen-activated protein kinase kinase kinase 2 Neighboring gene cytochrome P450, family 27, subfamily C, polypeptide 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables cholesterol 26-hydroxylase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 
enables vitamin D3 25-hydroxylase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in calcitriol biosynthetic process from calciol IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cholesterol metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
sterol 26-hydroxylase, mitochondrial

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007117.7 Reference GRCz11 Primary Assembly

    Range
    9467602..9529120 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_681430.8XP_686522.4  sterol 26-hydroxylase, mitochondrial

    UniProtKB/TrEMBL
    A0A8N7USW5, E7F3G8
    Related
    ENSDARP00000099662.3, ENSDART00000109113.4
    Conserved Domains (1) summary
    pfam00067
    Location:108569
    p450; Cytochrome P450