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wu:fa25f02 wu:fa25f02 [ Danio rerio (zebrafish) ]

Gene ID: 562425, updated on 4-Jan-2025

Summary

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Official Symbol
wu:fa25f02provided by ZNC
Official Full Name
wu:fa25f02provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-5281
See related
Ensembl:ENSDARG00000089303 AllianceGenome:ZFIN:ZDB-GENE-030131-5281
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fa25f02; wu:fi31e03; c25h11orf24
Summary
Predicted to be located in membrane. Orthologous to human C11orf24 (chromosome 11 open reading frame 24). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
human mouse all
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Genomic context

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See wu:fa25f02 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (10778030..10791397, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (10681234..10694624, complement)

Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene protein phosphatase 6, regulatory subunit 3 Neighboring gene low density lipoprotein receptor-related protein 5 Neighboring gene adaptor related protein complex 3 subunit sigma 2 Neighboring gene alanyl (membrane) aminopeptidase b, tandem duplicate 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Identification of zebrafish magnetoreceptor and cryptochrome homologs. Zhou Z, et al. Sci China Life Sci, 2016 Dec. PMID 27614751
  2. The zebrafish gene map defines ancestral vertebrate chromosomes. Woods IG, et al. Genome Res, 2005 Sep. PMID 16109975, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein C11orf24 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007136.7 Reference GRCz11 Primary Assembly

    Range
    10778030..10791397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_685812.10 → XP_690904.4  uncharacterized protein C11orf24 homolog

    UniProtKB/TrEMBL
    A0A8N7TB28, E7EYE9
    Related
    ENSDARP00000104692.1, ENSDART00000127054.3
Nucleotide Protein Strain
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