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EL288_RS06005 helix-turn-helix transcriptional regulator [ Bordetella bronchiseptica ]

Gene ID: 56477703, updated on 14-Dec-2024

Summary

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Gene symbol
EL288_RS06005
Gene description
helix-turn-helix transcriptional regulator
Locus tag
EL288_RS06005
Gene type
protein coding
Organism
Bordetella bronchiseptica (strain: NCTC10543, serovar: not available: to be reported later, nat-host: Rabbit, culture-collection: NCTC:10543)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella
Old locus tag
NCTC10543_01204
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Genomic context

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Location:
chromosome: 1

1 - NZ_LR134326.1Genomic Context describing neighboring genes Neighboring gene 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Neighboring gene MFS transporter Neighboring gene 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Neighboring gene carboxymuconolactone decarboxylase family protein Neighboring gene peroxiredoxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_LR134326.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens. Weigand MR, et al. mSystems, 2019 Nov 19. PMID 31744907, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
helix-turn-helix transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_LR134326.1 Reference assembly

    Range
    1277489..1278316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010931533.1 MULTISPECIES: helix-turn-helix transcriptional regulator [Bordetella]

    See identical proteins and their annotated locations for WP_010931533.1

    UniProtKB/TrEMBL
    A0A0T7CR29, A0A381A3J0, Q7VTI7
    Conserved Domains (2) summary
    cd06124
    Location:19 → 113
    cupin_NimR-like_N; AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain
    pfam12833
    Location:193 → 269
    HTH_18; Helix-turn-helix domain
Nucleotide Protein
Heading Accession and Version