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EL288_RS24205 cold-shock protein [ Bordetella bronchiseptica ]

Gene ID: 56481321, updated on 14-Dec-2024

Summary

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Gene symbol
EL288_RS24205
Gene description
cold-shock protein
Locus tag
EL288_RS24205
Gene type
protein coding
Organism
Bordetella bronchiseptica (strain: NCTC10543, serovar: not available: to be reported later, nat-host: Rabbit, culture-collection: NCTC:10543)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella
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Genomic context

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Location:
chromosome: 1

1 - NZ_LR134326.1Genomic Context describing neighboring genes Neighboring gene ParA family protein Neighboring gene 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG Neighboring gene tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG Neighboring gene pyridoxal phosphate-dependent aminotransferase Neighboring gene tripartite tricarboxylate transporter permease Neighboring gene tripartite tricarboxylate transporter TctB family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_LR134326.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete Genome Sequences of Four Different Bordetella sp. Isolates Causing Human Respiratory Infections. Weigand MR, et al. Genome Announc, 2016 Oct 6. PMID 27795250, Free PMC Article
  2. Structure and function of bacterial cold shock proteins. Horn G, et al. Cell Mol Life Sci, 2007 Jun. PMID 17437059, Free PMC Article
  3. Bacterial cold-shock proteins. Ermolenko DN, et al. Cell Mol Life Sci, 2002 Nov. PMID 12530521, Free PMC Article
  4. Cold-shock response and cold-shock proteins. Phadtare S, et al. Curr Opin Microbiol, 1999 Apr. PMID 10322168

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
cold-shock protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_LR134326.1 Reference assembly

    Range
    5173941..5174147 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003816068.1 MULTISPECIES: cold-shock protein [Bordetella]

    See identical proteins and their annotated locations for WP_003816068.1

    UniProtKB/TrEMBL
    A0A0C6PAE7, A0A0H3LS78, A0A261U0R0, K0MBS4, Q7W2I2
    Conserved Domains (1) summary
    COG1278
    Location:3 → 68
    CspC; Cold shock protein, CspA family [Transcription]
Nucleotide Protein
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