U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

kifc3 kinesin family member C3 [ Danio rerio (zebrafish) ]

Gene ID: 568367, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
kifc3provided by ZNC
Official Full Name
kinesin family member C3provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-3724
See related
AllianceGenome:ZFIN:ZDB-GENE-030131-3724
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fc51b05; wu:fc51b05; si:ch211-160j6.2
Summary
Predicted to enable ATP binding activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in system development. Predicted to act upstream of or within microtubule-based movement. Predicted to be located in cytoplasm and microtubule. Orthologous to human KIFC3 (kinesin family member C3). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See kifc3 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (45526550..45592410)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (45529560..45595456)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene LARGE xylosyl- and glucuronyltransferase 2 Neighboring gene uncharacterized LOC110438109 Neighboring gene cyclic nucleotide gated channel subunit beta 1a Neighboring gene uncharacterized LOC108180032 Neighboring gene WT1 transcription factor b Neighboring gene eukaryotic translation initiation factor 3, subunit M

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Expressed sequence tag analysis of expression profiles of zebrafish testis and ovary. Zeng S, et al. Gene, 2002 Jul 10. PMID 12234666
  2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
  
enables microtubule motor activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within microtubule-based movement IEA
Inferred from Electronic Annotation
more info
  
involved_in system development IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in microtubule IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
kinesin-like protein KIFC3
Names
novel kinesin motor domain containing protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    45526550..45592410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068214958.1 → XP_068071059.1  kinesin-like protein KIFC3 isoform X13

    UniProtKB/TrEMBL
    A0A8M9PFZ6

  2. XM_009293855.3 → XP_009292130.1  kinesin-like protein KIFC3 isoform X14

    See identical proteins and their annotated locations for XP_009292130.1

    UniProtKB/TrEMBL
    A0A8M3B361, A0A8M9PFZ6
    Conserved Domains (4) summary
    smart00129
    Location:566 → 895
    KISc; Kinesin motor, catalytic domain. ATPase
    cd01366
    Location:564 → 891
    KISc_C_terminal; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins
    pfam15619
    Location:208 → 386
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
    cl01090
    Location:362 → 407
    SlyX; SlyX

  3. XM_068214961.1 → XP_068071062.1  kinesin-like protein KIFC3 isoform X16

    UniProtKB/TrEMBL
    A0A8M9PFZ6

  4. XM_068214962.1 → XP_068071063.1  kinesin-like protein KIFC3 isoform X17

    UniProtKB/TrEMBL
    A0A8M9PFZ6

  5. XM_068214947.1 → XP_068071048.1  kinesin-like protein KIFC3 isoform X1

    UniProtKB/TrEMBL
    A0A8M3AV59

  6. XM_068214950.1 → XP_068071051.1  kinesin-like protein KIFC3 isoform X5

    UniProtKB/TrEMBL
    A0A8M3AS77

  7. XM_068214948.1 → XP_068071049.1  kinesin-like protein KIFC3 isoform X2

    UniProtKB/TrEMBL
    A0A8M3AV59

  8. XM_068214949.1 → XP_068071050.1  kinesin-like protein KIFC3 isoform X3

    UniProtKB/TrEMBL
    A0A8M2B5V3

  9. XM_068214951.1 → XP_068071052.1  kinesin-like protein KIFC3 isoform X6

    UniProtKB/TrEMBL
    A0A8M3AS77

  10. XM_068214952.1 → XP_068071053.1  kinesin-like protein KIFC3 isoform X7

    UniProtKB/TrEMBL
    A0A8M3AS77

  11. XM_009293849.4 → XP_009292124.1  kinesin-like protein KIFC3 isoform X4

    UniProtKB/TrEMBL
    A0A8M3AKN3, A0A8M3AV59
    Conserved Domains (5) summary
    smart00129
    Location:679 → 1008
    KISc; Kinesin motor, catalytic domain. ATPase
    cd01366
    Location:677 → 1004
    KISc_C_terminal; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins
    pfam05667
    Location:93 → 438
    DUF812; Protein of unknown function (DUF812)
    pfam15619
    Location:321 → 499
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
    cl01090
    Location:475 → 520
    SlyX; SlyX

  12. XM_068214953.1 → XP_068071054.1  kinesin-like protein KIFC3 isoform X8

    UniProtKB/TrEMBL
    A0A8M3AS77

  13. XM_068214954.1 → XP_068071055.1  kinesin-like protein KIFC3 isoform X9

    UniProtKB/TrEMBL
    A0A8M3AS77

  14. XM_009293853.4 → XP_009292128.1  kinesin-like protein KIFC3 isoform X10

    UniProtKB/TrEMBL
    A0A8M3AJU8, A0A8M3AS77
    Conserved Domains (5) summary
    TIGR02559
    Location:388 → 551
    HrpB7; type III secretion protein HrpB7
    smart00129
    Location:648 → 977
    KISc; Kinesin motor, catalytic domain. ATPase
    cd01366
    Location:646 → 973
    KISc_C_terminal; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins
    pfam01442
    Location:301 → 443
    Apolipoprotein; Apolipoprotein A1/A4/E domain
    pfam15035
    Location:388 → 543
    Rootletin; Ciliary rootlet component, centrosome cohesion

  15. XM_068214955.1 → XP_068071056.1  kinesin-like protein KIFC3 isoform X11

    UniProtKB/TrEMBL
    A0A8M3AS77

  16. XM_068214957.1 → XP_068071058.1  kinesin-like protein KIFC3 isoform X13

    UniProtKB/TrEMBL
    A0A8M9PFZ6

  17. XM_009293854.4 → XP_009292129.1  kinesin-like protein KIFC3 isoform X14

    See identical proteins and their annotated locations for XP_009292129.1

    UniProtKB/TrEMBL
    A0A8M3B361, A0A8M9PFZ6
    Conserved Domains (4) summary
    smart00129
    Location:566 → 895
    KISc; Kinesin motor, catalytic domain. ATPase
    cd01366
    Location:564 → 891
    KISc_C_terminal; Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins
    pfam15619
    Location:208 → 386
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
    cl01090
    Location:362 → 407
    SlyX; SlyX

  18. XM_068214956.1 → XP_068071057.1  kinesin-like protein KIFC3 isoform X12

    UniProtKB/TrEMBL
    A0A8M9PAK5

  19. XM_068214960.1 → XP_068071061.1  kinesin-like protein KIFC3 isoform X15

    UniProtKB/TrEMBL
    A0A8M9PFZ6

  20. XM_068214959.1 → XP_068071060.1  kinesin-like protein KIFC3 isoform X15

    UniProtKB/TrEMBL
    A0A8M9PFZ6
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools