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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001146097.1 → NP_001139569.1 ubiquitin carboxyl-terminal hydrolase 16
Status: PROVISIONAL
- Source sequence(s)
-
CR854897
- UniProtKB/Swiss-Prot
-
A8HAL1
- UniProtKB/TrEMBL
-
A0A8M9QC36
- Related
- ENSDARP00000080080.4, ENSDART00000085645.6
- Conserved Domains (4) summary
-
- cd02667
Location:624 → 812
- Peptidase_C19K; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam02148
Location:68 → 124
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
- cl02553
Location:209 → 406
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- cl28246
Location:482 → 614
- DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007126.7 Reference GRCz11 Primary Assembly
- Range
-
41290948..41311305 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_068213576.1 → XP_068069677.1 ubiquitin carboxyl-terminal hydrolase 16 isoform X3
- UniProtKB/TrEMBL
-
A0A8M9QHB9
-
XM_009291915.4 → XP_009290190.1 ubiquitin carboxyl-terminal hydrolase 16 isoform X2
- UniProtKB/TrEMBL
-
A0A8M3AQ52
- Conserved Domains (4) summary
-
- cd02667
Location:624 → 811
- Peptidase_C19K; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- cl02553
Location:209 → 406
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- pfam00443
Location:603 → 810
- UCH; Ubiquitin carboxyl-terminal hydrolase
- pfam02148
Location:68 → 124
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
-
XM_009291912.4 → XP_009290187.1 ubiquitin carboxyl-terminal hydrolase 16 isoform X1
- UniProtKB/Swiss-Prot
-
A8HAL1
- UniProtKB/TrEMBL
-
A0A8M9QC36
- Conserved Domains (4) summary
-
- cd02667
Location:624 → 812
- Peptidase_C19K; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam02148
Location:68 → 124
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
- cl02553
Location:209 → 406
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- cl28246
Location:482 → 614
- DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
-
XM_021481449.2 → XP_021337124.1 ubiquitin carboxyl-terminal hydrolase 16 isoform X3
- UniProtKB/TrEMBL
-
A0A8M9QHB9
- Conserved Domains (4) summary
-
- cd02667
Location:550 → 738
- Peptidase_C19K; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam02148
Location:1 → 50
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
- cl02553
Location:135 → 332
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- cl28246
Location:408 → 540
- DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
-
XM_021481448.2 → XP_021337123.1 ubiquitin carboxyl-terminal hydrolase 16 isoform X1
- UniProtKB/Swiss-Prot
-
A8HAL1
- UniProtKB/TrEMBL
-
A0A8M9QC36
- Conserved Domains (4) summary
-
- cd02667
Location:624 → 812
- Peptidase_C19K; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
- pfam02148
Location:68 → 124
- zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
- cl02553
Location:209 → 406
- Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
- cl28246
Location:482 → 614
- DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]