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tssE type VI secretion system baseplate subunit TssE [ Pectobacterium brasiliense ]

Gene ID: 57243312, updated on 3-Dec-2024

Summary

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Gene symbol
tssE
Gene description
type VI secretion system baseplate subunit TssE
Locus tag
GT391_RS12285
Gene type
protein coding
Organism
Pectobacterium brasiliense (strain: 1692, nat-host: potato)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Pectobacterium
Old locus tag
GT391_12285
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Genomic context

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NZ_CP047495.1Genomic Context describing neighboring genes Neighboring gene type VI secretion system contractile sheath small subunit Neighboring gene type VI secretion system contractile sheath large subunit Neighboring gene type VI secretion system baseplate subunit TssF Neighboring gene type VI secretion system baseplate subunit TssG Neighboring gene type VI secretion system-associated FHA domain protein TagH Neighboring gene type VI secretion system lipoprotein TssJ

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP047495.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete Genome Sequence of the Necrotrophic Plant-Pathogenic Bacterium Pectobacterium brasiliense 1692. Liu Y, et al. Microbiol Resour Announc, 2020 Mar 19. PMID 32193231, Free PMC Article
  2. In vivo expression technology identifies a type VI secretion system locus in Burkholderia pseudomallei that is induced upon invasion of macrophages. Shalom G, et al. Microbiology (Reading), 2007 Aug. PMID 17660433
  3. A virulence locus of Pseudomonas aeruginosa encodes a protein secretion apparatus. Mougous JD, et al. Science, 2006 Jun 9. PMID 16763151, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
type VI secretion system baseplate subunit TssE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP047495.1 Reference assembly

    Range
    2751421..2751852
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005972060.1 MULTISPECIES: type VI secretion system baseplate subunit TssE [Pectobacterium]

    See identical proteins and their annotated locations for WP_005972060.1

    UniProtKB/TrEMBL
    A0A086EV59, A0A9X8P3E1, A0AAW3ENB8
    Conserved Domains (1) summary
    TIGR03357
    Location:14 → 142
    VI_zyme; type VI secretion system lysozyme-like protein
Nucleotide Protein
Heading Accession and Version

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