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uncharacterized protein [ Chlamydomonas reinhardtii ]

Gene ID: 5725538, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
Phytozome:Cre02.g104350
Locus tag
CHLRE_02g104350v5
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Chlamydomonas reinhardtii (strain: CC-503 cw92 mt+)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas
Old locus tag
CHLREDRAFT_186873
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Genomic context

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Location:
chromosome: 2
Exon count:
14
Sequence:
Chromosome: 2; NC_057005.1 (5020798..5025315, complement)

Chromosome 2 - NC_057005.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_057005.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Chlamydomonas genome reveals the evolution of key animal and plant functions. Merchant SS, et al. Science, 2007 Oct 12. PMID 17932292, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_057005.1 Reference assembly

    Range
    5020798..5025315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001699718.2 → XP_001699770.1  uncharacterized protein CHLRE_02g104350v5 [Chlamydomonas reinhardtii]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8I4C2
    Conserved Domains (3) summary
    cd02961
    Location:148 → 261
    PDI_a_family; Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family include PDI ...
    pfam07970
    Location:286 → 455
    COPIIcoated_ERV; Endoplasmic reticulum vesicle transporter
    pfam13850
    Location:8 → 95
    ERGIC_N; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)

  2. XM_043059772.1 → XP_042927406.1  uncharacterized protein CHLRE_02g104350v5 [Chlamydomonas reinhardtii]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2K3E2I4
    Conserved Domains (3) summary
    cd02961
    Location:150 → 263
    PDI_a_family; Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic proteins involved in oxidative protein folding in the endoplasmic reticulum (ER) by acting as catalysts and folding assistants. Members of this family include PDI ...
    pfam07970
    Location:283 → 457
    COPIIcoated_ERV; Endoplasmic reticulum vesicle transporter
    pfam13850
    Location:8 → 99
    ERGIC_N; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)
Nucleotide Protein
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