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18SrRNA-Psi:CR41602 18S ribosomal RNA pseudogene:CR41602 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 5740420, updated on 11-Sep-2024

Summary

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Official Symbol
18SrRNA-Psi:CR41602provided by FlyBase
Official Full Name
18S ribosomal RNA pseudogene:CR41602provided by FlyBase
Primary source
FLYBASE:FBgn0085813
Locus tag
Dmel_CR41602
See related
AllianceGenome:FB:FBgn0085813
Gene type
rRNA
RNA name
18S ribosomal RNA pseudogene
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
18S (41602); CR41602; Dmel\CR41602
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Genomic context

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See 18SrRNA-Psi:CR41602 in Genome Data Viewer
Location:
20F4-20F4; 1-66 cM
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (23211192..23213166)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) XHet NW_001848859.1 (190010..196035)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene 2S ribosomal RNA pseudogene:CR40677 Neighboring gene 28S ribosomal RNA pseudogene:CR45855 Neighboring gene 5.8S ribosomal RNA pseudogene:CR45857 Neighboring gene 2S ribosomal RNA pseudogene:CR45858

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Tandem stem-loops in roX RNAs act together to mediate X chromosome dosage compensation in Drosophila. Ilik IA, et al. Mol Cell, 2013 Jul 25. PMID 23870142, Free PMC Article
  2. Comparative transcriptomic analysis of human and Drosophila extracellular vesicles. Lefebvre FA, et al. Sci Rep, 2016 Jun 10. PMID 27282340, Free PMC Article
  3. Comparative RNA-Seq analyses of Drosophila plasmatocytes reveal gene specific signatures in response to clean injury and septic injury. Ramond E, et al. PLoS One, 2020. PMID 32598400, Free PMC Article
  4. Single-cell transcriptome maps of myeloid blood cell lineages in Drosophila. Cho B, et al. Nat Commun, 2020 Sep 8. PMID 32900993, Free PMC Article
  5. The many landscapes of recombination in Drosophila melanogaster. Comeron JM, et al. PLoS Genet, 2012. PMID 23071443, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

  • 18SrRNA-Psi:CR41602-RB; Dmel\18SrRNA-Psi:CR41602-RB; CR41602-RB; Dmel\CR41602-RB
  • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org
Nucleotide Protein
Heading Accession and Version

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