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snoRNA:Me28S-G1083b [ Drosophila melanogaster (fruit fly) ]

Gene ID: 5740645, updated on 9-Dec-2024

Summary

Official Symbol
snoRNA:Me28S-G1083bprovided by FlyBase
Primary source
FLYBASE:FBgn0082934
Locus tag
Dmel_CR34563
See related
AllianceGenome:FB:FBgn0082934
Gene type
ncRNA
RNA name
snoRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CR34563; Dmel\CR34563; DmSnR60; DmSnR60b; Me28S-Gm1083b
Summary
Predicted to enable rRNA 2'-O-ribose methylation guide activity. Predicted to be involved in rRNA 2'-O-methylation. Located in nucleolus. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See snoRNA:Me28S-G1083b in Genome Data Viewer
Location:
60C2-60C2; 2-106 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (24185087..24185169)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (20072610..20072692)

Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Nucleolar protein at 60B Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

General gene information

  • snoRNA:Me28S-G1083b-RA; Dmel\snoRNA:Me28S-G1083b-RA; CR34563-RA; Dmel\CR34563-RA

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in RNA processing  
involved_in rRNA 2'-O-methylation PubMed 
Component Evidence Code Pubs
located_in nucleolus PubMed 
located_in nucleolus  

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033778.4 Reference assembly

    Range
    24185087..24185169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_003832.1 RNA Sequence

    Status: REVIEWED

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