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PPRCHA0_RS11920 LysR family transcriptional regulator [ Pseudomonas protegens CHA0 ]

Gene ID: 57475317, updated on 16-Dec-2024

Summary

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Gene symbol
PPRCHA0_RS11920
Gene description
LysR family transcriptional regulator
Locus tag
PPRCHA0_RS11920
Gene type
protein coding
Organism
Pseudomonas protegens CHA0 (strain: CHA0, type-material: type strain of Pseudomonas protegens)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
PPRCHA0_2300
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Genomic context

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Location:
chromosome: 1

1 - NZ_LS999205.1Genomic Context describing neighboring genes Neighboring gene thiol-disulfide oxidoreductase DCC family protein Neighboring gene Nramp family divalent metal transporter Neighboring gene DMT family transporter Neighboring gene DMT family transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_LS999205.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular biology of the LysR family of transcriptional regulators. Schell MA. Annu Rev Microbiol, 1993. PMID 8257110
  2. Structure and function of the LysR-type transcriptional regulator (LTTR) family proteins. Maddocks SE, et al. Microbiology (Reading), 2008 Dec. PMID 19047729

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
LysR family transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_LS999205.1 Reference assembly

    Range
    2572000..2572944 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_015635053.1 LysR family transcriptional regulator [Pseudomonas protegens]

    See identical proteins and their annotated locations for WP_015635053.1

    UniProtKB/TrEMBL
    A0A2C9EKB7
    Conserved Domains (2) summary
    cd08422
    Location:97 → 297
    PBP2_CrgA_like; The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain
    pfam00126
    Location:9 → 68
    HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
Nucleotide Protein
Heading Accession and Version