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27 baseplate hub [ Escherichia phage JS98 ]

Gene ID: 5783851, updated on 31-May-2023

Summary

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Gene symbol
27
Gene description
baseplate hub
Locus tag
EpJS98_gp187
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia phage JS98 (nat-host: Escherichia coli)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Straboviridae; Tevenvirinae; Dhakavirus
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Genomic context

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Sequence:
NC_010105.1 (116195..117364)

NC_010105.1Genomic Context describing neighboring genes Neighboring gene UvsY-like recombination mediator Neighboring gene baseplate wedge subunit Neighboring gene baseplate hub Neighboring gene baseplate hub assembly protein Neighboring gene baseplate hub distal subunit Neighboring gene baseplate hub subunit and tail length Neighboring gene baseplate tail tube cap Neighboring gene tail tube

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010105.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome analysis of phage JS98 defines a fourth major subgroup of T4-like phages in Escherichia coli. Zuber S, et al. J Bacteriol, 2007 Nov. PMID 17693496, Free PMC Article
  2. Comparative genomics of the T4-Like Escherichia coli phage JS98: implications for the evolution of T4 phages. Chibani-Chennoufi S, et al. J Bacteriol, 2004 Dec. PMID 15576776, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
baseplate hub
YP_001595316.1
  • gp27; structural virion protein; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the baseplate consists of a hub surrounded by six wedges; gp27 is a component of the hub

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010105.1 Reference assembly

    Range
    116195..117364
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001595316.1 baseplate hub [Escherichia phage JS98]

    See identical proteins and their annotated locations for YP_001595316.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A858I6W7, Q5QBV8
    Conserved Domains (1) summary
    PHA02612
    Location:3 → 374
    27; baseplate hub subunit; Provisional
Nucleotide Protein
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