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43 DNA polymerase [ Escherichia phage JS98 ]

Gene ID: 5783855, updated on 18-Aug-2023

Summary

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Gene symbol
43
Gene description
DNA polymerase
Locus tag
EpJS98_gp046
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia phage JS98 (nat-host: Escherichia coli)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Straboviridae; Tevenvirinae; Dhakavirus
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Genomic context

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Sequence:
NC_010105.1 (27245..29956, complement)

NC_010105.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene immunity to superinfection Neighboring gene hypothetical protein Neighboring gene translation repressor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010105.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome analysis of phage JS98 defines a fourth major subgroup of T4-like phages in Escherichia coli. Zuber S, et al. J Bacteriol, 2007 Nov. PMID 17693496, Free PMC Article
  2. Comparative genomics of the T4-Like Escherichia coli phage JS98: implications for the evolution of T4 phages. Chibani-Chennoufi S, et al. J Bacteriol, 2004 Dec. PMID 15576776, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
DNA polymerase
YP_001595175.1
  • possesses DNA synthesis, 3' to 5' exonuclease (ssDNA), dNTP binding, and DNA binding activities; belongs to the DNA polymerase type-B family

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010105.1 Reference assembly

    Range
    27245..29956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001595175.1 DNA polymerase [Escherichia phage JS98]

    See identical proteins and their annotated locations for YP_001595175.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A858I847, Q5QC22
    Conserved Domains (3) summary
    PHA02528
    Location:1 → 902
    43; DNA polymerase; Provisional
    cl10023
    Location:521 → 902
    POLBc; DNA polymerase type-B family catalytic domain. DNA-directed DNA polymerases elongate DNA by adding nucleotide triphosphate (dNTP) residues to the 5'-end of the growing chain of DNA. DNA-directed DNA polymerases are multifunctional with both synthetic ...
    cl10012
    Location:5 → 511
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
Nucleotide Protein
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