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51 baseplate hub assembly protein [ Escherichia phage JS98 ]

Gene ID: 5783858, updated on 18-Aug-2023

Summary

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Gene symbol
51
Gene description
baseplate hub assembly protein
Locus tag
EpJS98_gp186
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia phage JS98 (nat-host: Escherichia coli)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Straboviridae; Tevenvirinae; Dhakavirus
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Genomic context

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Sequence:
NC_010105.1 (115446..116198)

NC_010105.1Genomic Context describing neighboring genes Neighboring gene UvsY-like recombination mediator Neighboring gene baseplate wedge subunit Neighboring gene baseplate hub Neighboring gene baseplate hub Neighboring gene baseplate hub distal subunit Neighboring gene baseplate hub subunit and tail length Neighboring gene baseplate tail tube cap Neighboring gene tail tube

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010105.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome analysis of phage JS98 defines a fourth major subgroup of T4-like phages in Escherichia coli. Zuber S, et al. J Bacteriol, 2007 Nov. PMID 17693496, Free PMC Article
  2. Comparative genomics of the T4-Like Escherichia coli phage JS98: implications for the evolution of T4 phages. Chibani-Chennoufi S, et al. J Bacteriol, 2004 Dec. PMID 15576776, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
baseplate hub assembly protein
YP_001595315.1
  • gp51; chaperone; in bacteriophage T4 and related viruses, the virion is composed of head and tail components; the capsid tail consists of a contractile outer sheath, a inner tube, and a baseplate; the baseplate consists of a hub surrounded by six wedges; gp51 catalyzes assembly of the hub

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010105.1 Reference assembly

    Range
    115446..116198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001595315.1 baseplate hub assembly protein [Escherichia phage JS98]

    See identical proteins and their annotated locations for YP_001595315.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A858I0Z8, Q5QBV9
    Conserved Domains (2) summary
    PHA02611
    Location:1 → 250
    51; baseplate hub assembly protein; Provisional
    pfam12322
    Location:78 → 201
    T4_baseplate; T4 bacteriophage base plate protein
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases