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dda Dda-like helicase [ Escherichia phage JS98 ]

Gene ID: 5783860, updated on 18-Aug-2023

Summary

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Gene symbol
dda
Gene description
Dda-like helicase
Locus tag
EpJS98_gp013
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia phage JS98 (nat-host: Escherichia coli)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Straboviridae; Tevenvirinae; Dhakavirus
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Genomic context

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Sequence:
NC_010105.1 (8733..10064, complement)

NC_010105.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene exonuclease Neighboring gene DexA.1 hypothetical protein Neighboring gene Dda.1 hypothetical protein Neighboring gene Srd anti-sigma factor Neighboring gene RNA polymerase ADP-ribosylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010105.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome analysis of phage JS98 defines a fourth major subgroup of T4-like phages in Escherichia coli. Zuber S, et al. J Bacteriol, 2007 Nov. PMID 17693496, Free PMC Article
  2. Comparative genomics of the T4-Like Escherichia coli phage JS98: implications for the evolution of T4 phages. Chibani-Chennoufi S, et al. J Bacteriol, 2004 Dec. PMID 15576776, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
Dda-like helicase
YP_001595142.1
  • similar to bacteriophage T4 Dda DNA helicase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010105.1 Reference assembly

    Range
    8733..10064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001595142.1 Dda-like helicase [Escherichia phage JS98]

    See identical proteins and their annotated locations for YP_001595142.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A858I939, A8R8V4
    Conserved Domains (3) summary
    cd18809
    Location:397 → 441
    SF1_C_RecD; C-terminal helicase domain of RecD family helicases
    cd17933
    Location:10 → 179
    DEXSc_RecD-like; DEXS-box helicase domain of RecD and similar proteins
    pfam18343
    Location:263 → 393
    SH3_14; Dda helicase SH3 domain
Nucleotide Protein
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