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cd dCMP deaminase [ Escherichia phage JS98 ]

Gene ID: 5783871, updated on 18-Aug-2023

Summary

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Gene symbol
cd
Gene description
dCMP deaminase
Locus tag
EpJS98_gp210
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia phage JS98 (nat-host: Escherichia coli)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Straboviridae; Tevenvirinae; Dhakavirus
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Genomic context

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Sequence:
NC_010105.1 (132780..133325, complement)

NC_010105.1Genomic Context describing neighboring genes Neighboring gene gp31.1 conserved hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Cd.2 conserved hypothetical protein Neighboring gene Cd.3 conserved hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010105.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome analysis of phage JS98 defines a fourth major subgroup of T4-like phages in Escherichia coli. Zuber S, et al. J Bacteriol, 2007 Nov. PMID 17693496, Free PMC Article
  2. Comparative genomics of the T4-Like Escherichia coli phage JS98: implications for the evolution of T4 phages. Chibani-Chennoufi S, et al. J Bacteriol, 2004 Dec. PMID 15576776, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
dCMP deaminase
YP_001595339.1
  • dCMP deaminase; part of the T4 enzyme pathway that takes nucleoside diphosphates (NDPs) and deoxynucleoside monophosphates (dNMPs) from host DNA breakdown and converts them into deoxynucleoside triphosphates (dNTPs) used in viral DNA replication; dCMP deaminase converts deoxycytidine 5'-monophosphate (dCMP) to deoxyuridine 5'-monophosphate

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010105.1 Reference assembly

    Range
    132780..133325 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001595339.1 dCMP deaminase [Escherichia phage JS98]

    See identical proteins and their annotated locations for YP_001595339.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A858I0E0, A8R9K3
    Conserved Domains (1) summary
    PHA02588
    Location:1 → 177
    cd; deoxycytidylate deaminase; Provisional
Nucleotide Protein
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