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39.2 FmdB-like transcriptional regulator [ Escherichia phage JS98 ]

Gene ID: 5783872, updated on 31-May-2023

Summary

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Gene symbol
39.2
Gene description
FmdB-like transcriptional regulator
Locus tag
EpJS98_gp005
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia phage JS98 (nat-host: Escherichia coli)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Straboviridae; Tevenvirinae; Dhakavirus
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Genomic context

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Sequence:
NC_010105.1 (5176..5352, complement)

NC_010105.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase II large subunit Neighboring gene gp39.1 hypothetical protein Neighboring gene putative RNA metabolism modulator Neighboring gene cef modifier of supressor tRNAs Neighboring gene MotB-like transcriptional regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010105.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome analysis of phage JS98 defines a fourth major subgroup of T4-like phages in Escherichia coli. Zuber S, et al. J Bacteriol, 2007 Nov. PMID 17693496, Free PMC Article
  2. Comparative genomics of the T4-Like Escherichia coli phage JS98: implications for the evolution of T4 phages. Chibani-Chennoufi S, et al. J Bacteriol, 2004 Dec. PMID 15576776, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
FmdB-like transcriptional regulator
YP_001595134.1
  • similar to bacteriophage T4 gp39.2 hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010105.1 Reference assembly

    Range
    5176..5352 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001595134.1 FmdB-like transcriptional regulator [Escherichia phage JS98]

    See identical proteins and their annotated locations for YP_001595134.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A858I0F9, A8R8T5
    Conserved Domains (1) summary
    smart00834
    Location:1 → 43
    CxxC_CXXC_SSSS; Putative regulatory protein
Nucleotide Protein
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