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F2P57_RS11955 RidA family protein [ [Clostridium] symbiosum ]

Gene ID: 57969307, updated on 15-Dec-2024

Summary

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Gene symbol
F2P57_RS11955
Gene description
RidA family protein
Locus tag
F2P57_RS11955
Gene type
protein coding
Organism
[Clostridium] symbiosum (strain: LT0011, nat-host: Homo sapiens)
Lineage
Bacteria; Bacillati; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae
Old locus tag
F2P57_11955
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Genomic context

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NZ_VWSY01000001.1Genomic Context describing neighboring genes Neighboring gene AmmeMemoRadiSam system protein A Neighboring gene AmmeMemoRadiSam system radical SAM enzyme Neighboring gene DUF1847 domain-containing protein Neighboring gene threonine/serine dehydratase Neighboring gene MurR/RpiR family transcriptional regulator Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_VWSY01000001.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic and experimental evidence for multiple metabolic functions in the RidA/YjgF/YER057c/UK114 (Rid) protein family. Niehaus TD, et al. BMC Genomics, 2015 May 15. PMID 25975565, Free PMC Article
  2. Conserved YjgF protein family deaminates reactive enamine/imine intermediates of pyridoxal 5'-phosphate (PLP)-dependent enzyme reactions. Lambrecht JA, et al. J Biol Chem, 2012 Jan 27. PMID 22094463, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
RidA family protein
WP_003505173.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_VWSY01000001.1 Reference assembly

    Range
    2574120..2574494
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003505173.1 RidA family protein [[Clostridium] symbiosum]

    See identical proteins and their annotated locations for WP_003505173.1

    UniProtKB/TrEMBL
    A0A1C6JF67, A0AAW5F7D4, E7GUG1
    Conserved Domains (1) summary
    cd00448
    Location:14 → 120
    YjgF_YER057c_UK114_family; YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no ...
Nucleotide Protein
Heading Accession and Version