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C6P13_RS07035 RsmF rRNA methyltransferase first C-terminal domain-containing protein [ Weissella confusa ]

Gene ID: 57979236, updated on 30-Mar-2024

Summary

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Gene symbol
C6P13_RS07035
Gene description
RsmF rRNA methyltransferase first C-terminal domain-containing protein
Locus tag
C6P13_RS07035
Gene type
protein coding
Organism
Weissella confusa (strain: VTT E-133279)
Lineage
Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Weissella
Old locus tag
C6P13_07045
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Genomic context

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NZ_CP027563.1Genomic Context describing neighboring genes Neighboring gene Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB Neighboring gene Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA Neighboring gene Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC Neighboring gene Cof-type HAD-IIB family hydrolase Neighboring gene sodium:proton antiporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP027563.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The structure of the RNA m5C methyltransferase YebU from Escherichia coli reveals a C-terminal RNA-recruiting PUA domain. Hallberg BM, et al. J Mol Biol, 2006 Jul 21. PMID 16793063
  2. Multi-site-specific 16S rRNA methyltransferase RsmF from Thermus thermophilus. Demirci H, et al. RNA, 2010 Aug. PMID 20558545, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
RsmF rRNA methyltransferase first C-terminal domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP027563.1 Reference assembly

    Range
    1453952..1455355 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003609640.1 RsmF rRNA methyltransferase first C-terminal domain-containing protein [Weissella confusa]

    See identical proteins and their annotated locations for WP_003609640.1

    Conserved Domains (2) summary
    COG0144
    Location:3 → 294
    RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]
    COG3270
    Location:322 → 452
    Ncl1; Ribosome biogenesis protein, NOL1/NOP2/fmu family [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version