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FOC38_RS11440 MATE family efflux transporter [ Yersinia intermedia ]

Gene ID: 58047545, updated on 13-Dec-2024

Summary

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Gene symbol
FOC38_RS11440
Gene description
MATE family efflux transporter
Locus tag
FOC38_RS11440
Gene type
protein coding
Organism
Yersinia intermedia (strain: FDAARGOS_730, nat-host: Homo sapiens, culture-collection: FDA:FDAARGOS_730)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia
Old locus tag
FOC38_11440
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Genomic context

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NZ_CP046293.1Genomic Context describing neighboring genes Neighboring gene cyclopropane fatty acyl phospholipid synthase Neighboring gene riboflavin synthase Neighboring gene hypothetical protein Neighboring gene tRNA-Val

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP046293.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural basis for the blockade of MATE multidrug efflux pumps. Radchenko M, et al. Nat Commun, 2015 Aug 6. PMID 26246409, Free PMC Article
  2. Principles of Alternating Access in Multidrug and Toxin Extrusion (MATE) Transporters. Claxton DP, et al. J Mol Biol, 2021 Aug 6. PMID 33774036, Free PMC Article
  3. Structural biology of the multidrug and toxic compound extrusion superfamily transporters. Kusakizako T, et al. Biochim Biophys Acta Biomembr, 2020 Dec 1. PMID 31866287
  4. Thirty-Two Complete Genome Assemblies of Nine Yersinia Species, Including Y. pestis, Y. pseudotuberculosis, and Y. enterocolitica. Johnson SL, et al. Genome Announc, 2015 Apr 30. PMID 25931590, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
MATE family efflux transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP046293.1 Reference assembly

    Range
    2420032..2421405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005184490.1 MULTISPECIES: MATE family efflux transporter [Yersinia]

    See identical proteins and their annotated locations for WP_005184490.1

    Conserved Domains (1) summary
    PRK01766
    Location:1 → 457
    PRK01766; multidrug efflux protein; Reviewed
Nucleotide Protein
Heading Accession and Version