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MONBRDRAFT_16125 hypothetical protein [ Monosiga brevicollis MX1 ]

Gene ID: 5889861, updated on 23-Nov-2023

Summary

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Gene symbol
MONBRDRAFT_16125
Gene description
hypothetical protein
Locus tag
MONBRDRAFT_16125
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Monosiga brevicollis MX1 (strain: MX1)
Lineage
Eukaryota; Choanoflagellida; Craspedida; Salpingoecidae; Monosiga
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Genomic context

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See MONBRDRAFT_16125 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_001865043.1Genomic Context describing neighboring genes Neighboring gene PI3K-CA gamma Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001865043.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans. King N, et al. Nature, 2008 Feb 14. PMID 18273011, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001865043.1 Reference assembly

    Range
    1001476..1002499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001744489.1 → XP_001744541.1  uncharacterized protein MONBRDRAFT_16125 [Monosiga brevicollis MX1]

    See identical proteins and their annotated locations for XP_001744541.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A9UW28
    Conserved Domains (2) summary
    PTZ00189
    Location:1 → 161
    PTZ00189; 60S ribosomal protein L21; Provisional
    pfam01157
    Location:5 → 97
    Ribosomal_L21e; Ribosomal protein L21e
Protein Accession Links
GenPept Link UniProtKB Link
EDQ90490.1

Gene LinkOut

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Molecular Biology Databases
Research Materials