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EDI_128900 60S ribosomal protein L21 [ Entamoeba dispar SAW760 ]

Gene ID: 5914084, updated on 17-May-2024

Summary

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Gene symbol
EDI_128900
Gene description
60S ribosomal protein L21
Locus tag
EDI_128900
See related
AmoebaDB:EDI_128900; VEuPathDB:EDI_128900
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Entamoeba dispar SAW760 (strain: SAW760)
Lineage
Eukaryota; Amoebozoa; Evosea; Archamoebae; Mastigamoebida; Entamoebidae; Entamoeba
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Genomic context

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See EDI_128900 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001855825.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1, putative Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001855825.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L21
XP_001741352.1
  • encoded by transcript EDI_128900A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001855825.1 Reference assembly

    Range
    56418..56918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001741300.1 → XP_001741352.1  60S ribosomal protein L21 [Entamoeba dispar SAW760]

    See identical proteins and their annotated locations for XP_001741352.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B0ECM5
    Conserved Domains (2) summary
    PTZ00189
    Location:1 → 166
    PTZ00189; 60S ribosomal protein L21; Provisional
    pfam01157
    Location:5 → 97
    Ribosomal_L21e; Ribosomal protein L21e
Nucleotide Protein
Heading Accession and Version

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