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Bmp15 bone morphogenetic protein 15 [ Rattus norvegicus (Norway rat) ]

Gene ID: 59302, updated on 4-Jan-2025

Summary

Official Symbol
Bmp15provided by RGD
Official Full Name
bone morphogenetic protein 15provided by RGD
Primary source
RGD:70990
See related
EnsemblRapid:ENSRNOG00000002984 AllianceGenome:RGD:70990
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Gdf-9b
Summary
Predicted to enable cytokine activity. Involved in positive regulation of DNA-templated transcription. Predicted to be located in cytoplasm. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in ovarian dysgenesis 2 and primary ovarian insufficiency. Orthologous to human BMP15 (bone morphogenetic protein 15). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Lung (RPKM 20.6), Kidney (RPKM 13.4) and 4 other tissues See more
Orthologs
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Genomic context

See Bmp15 in Genome Data Viewer
Location:
Xq12
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) X NC_086039.1 (18840943..18846006)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) X NC_051356.1 (16169123..16174187)
106 previous assembly Rnor_6.0 (GCF_000001895.5) X NC_005120.4 (17016831..17021894)

Chromosome X - NC_086039.1Genomic Context describing neighboring genes Neighboring gene shroom family member 4 Neighboring gene cysteine-rich protein 2 like 2 Neighboring gene uncharacterized LOC103694470 Neighboring gene NOP2 nucleolar protein, pseudogene 2 Neighboring gene nudix hydrolase 11

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables cytokine activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in ovarian cumulus expansion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
bone morphogenetic protein 15
Names
growth differentiation factor-9B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_021670.1NP_067702.1  bone morphogenetic protein 15 precursor

    See identical proteins and their annotated locations for NP_067702.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ132407
    UniProtKB/TrEMBL
    E9PTU9, Q9WUW1
    Related
    ENSRNOP00000003989.1, ENSRNOT00000003989.5
    Conserved Domains (1) summary
    pfam00019
    Location:288390
    TGF_beta; Transforming growth factor beta like domain

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086039.1 Reference GRCr8

    Range
    18840943..18846006
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)