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Npff neuropeptide FF-amide peptide precursor [ Rattus norvegicus (Norway rat) ]

Gene ID: 60337, updated on 4-Jan-2025

Summary

Official Symbol
Npffprovided by RGD
Official Full Name
neuropeptide FF-amide peptide precursorprovided by RGD
Primary source
RGD:62033
See related
EnsemblRapid:ENSRNOG00000074090 AllianceGenome:RGD:62033
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Enables G protein-coupled receptor binding activity and neuropeptide hormone activity. Involved in several processes, including negative regulation of appetite; negative regulation of insulin secretion; and peptide hormone secretion. Located in several cellular components, including axon terminus; dendrite; and perikaryon. Is active in neuronal dense core vesicle. Orthologous to human NPFF (neuropeptide FF-amide peptide precursor). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Lung (RPKM 44.7), Spleen (RPKM 32.0) and 9 other tissues See more
Orthologs
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Genomic context

See Npff in Genome Data Viewer
Location:
7q36
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (135533050..135533839, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (133654530..133655319, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (144127084..144127873, complement)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene poly(rC) binding protein 2 Neighboring gene mitogen activated protein kinase kinase kinase 12 Neighboring gene Tarbp2 subunit of RISC loading complex Neighboring gene activating transcription factor 7 Neighboring gene uncharacterized LOC120093744 Neighboring gene ATP synthase membrane subunit c locus 2

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables G protein-coupled receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor binding IDA
Inferred from Direct Assay
more info
PubMed 
enables neuropeptide activity ISO
Inferred from Sequence Orthology
more info
 
enables neuropeptide hormone activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables neuropeptide hormone activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in acute inflammatory response to antigenic stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in excitatory postsynaptic potential IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in excitatory postsynaptic potential IDA
Inferred from Direct Assay
more info
PubMed 
involved_in maternal process involved in female pregnancy IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in negative regulation of appetite IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of heart rate IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of insulin secretion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in neuropeptide signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of blood pressure IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of cytosolic calcium ion concentration IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of membrane depolarization IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to xenobiotic stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in somatostatin secretion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in spinal cord development IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in vasopressin secretion IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in axon terminus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in axon terminus IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in dendrite IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in dendrite IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in neuronal dense core vesicle IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in perikaryon IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in perikaryon IDA
Inferred from Direct Assay
more info
PubMed 
located_in postsynapse IEA
Inferred from Electronic Annotation
more info
 
located_in vesicle IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
pro-FMRFamide-related neuropeptide FF
Names
FMRFamide-related peptides

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_022586.1NP_072108.1  pro-FMRFamide-related neuropeptide FF preproprotein

    See identical proteins and their annotated locations for NP_072108.1

    Status: VALIDATED

    Source sequence(s)
    AF148700
    UniProtKB/Swiss-Prot
    Q9WVA9
    UniProtKB/TrEMBL
    A6KCW7
    Related
    ENSRNOP00000102833.1, ENSRNOT00000144668.1
    Conserved Domains (1) summary
    pfam15085
    Location:57114
    NPFF; Neuropeptide FF

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    135533050..135533839 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)