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nitr3b novel immune-type receptor 3b [ Danio rerio (zebrafish) ]

Gene ID: 60659, updated on 4-Jan-2025

Summary

Official Symbol
nitr3bprovided by ZNC
Official Full Name
novel immune-type receptor 3bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-001106-16
See related
Ensembl:ENSDARG00000057620 AllianceGenome:ZFIN:ZDB-GENE-001106-16
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
nitr; nitr3; nitr3b_2; nitr3d_7; nitr3r.1; nitr3r.3; nitr3r.9; si:dz221h6.1
Summary
Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See nitr3b in Genome Data Viewer
Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (17412985..17416092, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (17161019..17164119, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene novel immune-type receptor 7b Neighboring gene novel immune-type receptor 3a Neighboring gene novel immune-type receptor 3d Neighboring gene novel immune-type receptor 2a Neighboring gene novel immune-type receptor 2b

Genomic regions, transcripts, and products

General protein information

Preferred Names
novel immune-type receptor 3b
Names
immune-type receptor
novel immune-type receptor 3, related 1
novel immune-type receptor 3, related 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007211.2NP_001007212.2  novel immune-type receptor 3b

    Status: VALIDATED

    Source sequence(s)
    CU179759
    UniProtKB/TrEMBL
    A0A0G2KNY4, A0A0N4SU08, A0A8N7XJE8, Q1MTL6, Q801W9, Q8UV76
    Related
    ENSDARP00000134088.2, ENSDART00000170003.2
    Conserved Domains (1) summary
    pfam07686
    Location:26130
    V-set; Immunoglobulin V-set domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    17412985..17416092 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394681.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    190661..193682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)