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CKV90_RS11035 glycoside hydrolase family 13 protein [ Listeria welshimeri ]

Gene ID: 61190046, updated on 14-Dec-2024

Summary

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Gene symbol
CKV90_RS11035
Gene description
glycoside hydrolase family 13 protein
Locus tag
CKV90_RS11035
Gene type
protein coding
Organism
Listeria welshimeri (strain: NCTC11857, culture-collection: NCTC:11857, type-material: type strain of Listeria welshimeri)
Lineage
Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria
Old locus tag
SAMEA4534872_02250
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Genomic context

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Location:
chromosome: 1

1 - NZ_LT906444.1Genomic Context describing neighboring genes Neighboring gene carbohydrate ABC transporter permease Neighboring gene extracellular solute-binding protein Neighboring gene CPBP family intramembrane glutamic endopeptidase Neighboring gene LacI family DNA-binding transcriptional regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_LT906444.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of the sequence motif of glycoside hydrolase 13 family members. Kumar V. Bioinformation, 2011 Mar 26. PMID 21544166, Free PMC Article
  2. Dividing the large glycoside hydrolase family 13 into subfamilies: towards improved functional annotations of alpha-amylase-related proteins. Stam MR, et al. Protein Eng Des Sel, 2006 Dec. PMID 17085431
  3. Relationship of sequence and structure to specificity in the alpha-amylase family of enzymes. MacGregor EA, et al. Biochim Biophys Acta, 2001 Mar 9. PMID 11257505

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
glycoside hydrolase family 13 protein
WP_011702903.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_LT906444.1 Reference assembly

    Range
    2179941..2181716 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011702903.1 glycoside hydrolase family 13 protein [Listeria welshimeri]

    See identical proteins and their annotated locations for WP_011702903.1

    UniProtKB/TrEMBL
    A0A7X0T3N1, A0AKN2
    Conserved Domains (2) summary
    cd11338
    Location:137 → 518
    AmyAc_CMD; Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins
    pfam02903
    Location:1 → 124
    Alpha-amylase_N; Alpha amylase, N-terminal ig-like domain
Nucleotide Protein
Heading Accession and Version

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