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HQN82_RS02675 TraR/DksA C4-type zinc finger protein [ Agrobacterium pusense ]

Gene ID: 61454199, updated on 13-May-2024

Summary

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Gene symbol
HQN82_RS02675
Gene description
TraR/DksA C4-type zinc finger protein
Locus tag
HQN82_RS02675
Gene type
protein coding
Organism
Agrobacterium pusense (strain: 76, nat-host: Fusarium oxysporum f. sp. cucumerinum)
Lineage
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium
Old locus tag
HQN82_02675
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Genomic context

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Location:
chromosome: R76C1

R76C1 - NZ_CP053856.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene universal stress protein Neighboring gene hemolysin III family protein Neighboring gene GNAT family N-acetyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP053856.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DksA: a critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP. Paul BJ, et al. Cell, 2004 Aug 6. PMID 15294157
  2. Complete Genome Sequence of the Sesbania Symbiont and Rice Growth-Promoting Endophyte Rhizobium sp. Strain IRBG74. Crook MB, et al. Genome Announc, 2013 Nov 21. PMID 24265489, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
TraR/DksA C4-type zinc finger protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP053856.1 Reference assembly

    Range
    550018..550338
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_006700060.1 MULTISPECIES: TraR/DksA C4-type zinc finger protein [Rhizobium/Agrobacterium group]

    See identical proteins and their annotated locations for WP_006700060.1

    UniProtKB/TrEMBL
    A0A1L9CW29, A0A349XR36, A0A4S1H7R4, A0A9W5B2F6, U4Q5I4
    Conserved Domains (2) summary
    pfam01258
    Location:73 → 104
    zf-dskA_traR; Prokaryotic dksA/traR C4-type zinc finger
    pfam13779
    Location:10 → 74
    DUF4175; Domain of unknown function (DUF4175)
Nucleotide Protein
Heading Accession and Version