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Apeg3 antisense paternally expressed gene 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 619476, updated on 17-Aug-2024

Summary

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Symbol
Apeg3provided by RGD
Full Name
antisense paternally expressed gene 3provided by RGD
Primary source
RGD:1563921
See related
AllianceGenome:RGD:1563921
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
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Genomic context

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See Apeg3 in Genome Data Viewer
Location:
1q12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (76154484..76155415, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (67121402..67122333, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (70234160..70235091, complement)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene microRNA 3099 Neighboring gene small nucleolar RNA SNORA40 Neighboring gene paternally expressed 3 Neighboring gene zinc finger, imprinted 1 Neighboring gene olfactory receptor pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. APeg3, a novel paternally expressed gene 3 antisense RNA transcript specifically expressed in vasopressinergic magnocellular neurons in the rat supraoptic nucleus. Glasgow E, et al. Brain Res Mol Brain Res, 2005 Jun 13. PMID 15950772
  2. APeg3: regulation of Peg3 through an evolutionarily conserved ncRNA. Frey WD, et al. Gene, 2014 May 1. PMID 24582979, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The 1-kb APeg3 mRNA was determined by 5' and 3' RACE, and contains an open reading frame that predicts a protein of 93 amino acids. This mRNA is predominantly expressed in VP-MCNs (vasopressinergic magnocellular neurons).
    Title: APeg3, a novel paternally expressed gene 3 antisense RNA transcript specifically expressed in vasopressinergic magnocellular neurons in the rat supraoptic nucleus.
Submit: New GeneRIF Correction

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_130955.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    76154484..76155415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001034160.1: Suppressed sequence

    Description
    NM_001034160.1: This RefSeq was permanently suppressed because the predicted protein is not well supported.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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