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AI429214 expressed sequence AI429214 [ Mus musculus (house mouse) ]

Gene ID: 621080, updated on 27-Nov-2024

Summary

Official Symbol
AI429214provided by MGI
Official Full Name
expressed sequence AI429214provided by MGI
Primary source
MGI:MGI:2142538
See related
Ensembl:ENSMUSG00000074384 AllianceGenome:MGI:2142538
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Orthologous to human C8orf48 (chromosome 8 open reading frame 48). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See AI429214 in Genome Data Viewer
Location:
8 A4; 8 23.15 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (37460729..37462687)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (36993575..36995533)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene deleted in liver cancer 1 Neighboring gene predicted gene, 53415 Neighboring gene RIKEN cDNA G630064G18 gene Neighboring gene predicted gene, 39166 Neighboring gene predicted gene 10683 Neighboring gene testis expressed gene 24 pseudogene

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein C8orf48 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039220.3NP_001034309.1  uncharacterized protein C8orf48 homolog

    See identical proteins and their annotated locations for NP_001034309.1

    Status: VALIDATED

    Source sequence(s)
    AK132736, AK161334, BE956615, BY294724
    Consensus CDS
    CCDS22250.1
    UniProtKB/Swiss-Prot
    Q3TTJ4
    UniProtKB/TrEMBL
    B9EKF7
    Related
    ENSMUSP00000096424.4, ENSMUST00000098825.5
    Conserved Domains (1) summary
    pfam15379
    Location:175277
    DUF4606; Domain of unknown function (DUF4606)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    37460729..37462687
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)