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Gm21953 predicted gene, 21953 [ Mus musculus (house mouse) ]

Gene ID: 621580, updated on 27-Nov-2024

Summary

Official Symbol
Gm21953provided by MGI
Official Full Name
predicted gene, 21953provided by MGI
Primary source
MGI:MGI:5439404
See related
Ensembl:ENSMUSG00000094695 AllianceGenome:MGI:5439404
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm13308
Expression
Biased expression in testis adult (RPKM 137.7), cortex adult (RPKM 26.1) and 6 other tissues See more
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Genomic context

See Gm21953 in Genome Data Viewer
Location:
4 A5; 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (42293864..42294898)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (42293864..42294898)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine ligand 21B (leucine) Neighboring gene predicted gene, 50470 Neighboring gene small inducible cytokine A19, pseudogene 1 Neighboring gene spermatogenesis associated 31 subfamily F member 1C Neighboring gene predicted gene 21980 Neighboring gene predicted gene, 46892 Neighboring gene protein FAM205A-like Neighboring gene predicted gene, 21586

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
C-C motif chemokine 27-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177580.1NP_001171051.1  C-C motif chemokine 27-like

    See identical proteins and their annotated locations for NP_001171051.1

    Status: VALIDATED

    Source sequence(s)
    AL844494, BY102321
    Consensus CDS
    CCDS57271.1
    UniProtKB/TrEMBL
    A2APU9, F6T205
    Related
    ENSMUSP00000158629.2, ENSMUST00000238203.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    42293864..42294898
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)