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F-box SKIP23-like protein (DUF295) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 6240365, updated on 18-Sep-2024

Summary

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Official Full Name
F-box SKIP23-like protein (DUF295)
Primary source
TAIR:AT4G35733
Locus tag
AT4G35733
See related
Araport:AT4G35733
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (16934236..16935502)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Regulator of Vps4 activity in the MVB pathway protein Neighboring gene miscRNA Neighboring gene DEAD/DEAH box RNA helicase family protein Neighboring gene SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein Neighboring gene NAD(P)H dehydrogenase (quinone)s

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_001125652.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
F-box SKIP23-like protein (DUF295)
NP_001119124.1
  • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT1G44080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    16934236..16935502
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001125652.1 → NP_001119124.1  F-box SKIP23-like protein (DUF295) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001119124.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B3H6C3, O81805
    UniProtKB/TrEMBL
    A0A178UWW2, A0A5S9XZ04, A0A654FVW0
    Conserved Domains (1) summary
    PLN03215
    Location:7 → 358
    PLN03215; ascorbic acid mannose pathway regulator 1; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B3H6C3.1

Gene LinkOut

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