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B3 domain protein, putative (DUF313) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 6241414, updated on 18-Sep-2024

Summary

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Official Full Name
B3 domain protein, putative (DUF313)
Primary source
TAIR:AT2G32645
Locus tag
AT2G32645
See related
Araport:AT2G32645
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (13851667..13853343, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Lycopene beta/epsilon cyclase protein Neighboring gene RmlC-like cupins superfamily protein Neighboring gene ncRNA Neighboring gene receptor like protein 22 Neighboring gene ncRNA Neighboring gene vesicle-associated membrane protein 725 Neighboring gene receptor like protein 23

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_001124960.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
B3 domain protein, putative (DUF313)
NP_001118432.1
  • Domain of unknown function (DUF313); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF313 (InterPro:IPR005508); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF313) (TAIR:AT2G27410.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13851667..13853343 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001124960.1 → NP_001118432.1  B3 domain protein, putative (DUF313) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001118432.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0MDZ7, Q1G3B8
    Conserved Domains (1) summary
    pfam03754
    Location:1 → 101
    DUF313; Domain of unknown function (DUF313)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q1G3B8.2

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