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HMPREF9452_RS09295 helix-turn-helix transcriptional regulator [ Collinsella tanakaei YIT 12063 ]

Gene ID: 62759544, updated on 6-Jun-2024

Summary

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Gene symbol
HMPREF9452_RS09295
Gene description
helix-turn-helix transcriptional regulator
Locus tag
HMPREF9452_RS09295
Gene type
protein coding
Organism
Collinsella tanakaei YIT 12063 (strain: YIT 12063, nat-host: Homo sapiens, type-material: type strain of Collinsella tanakaei)
Lineage
Bacteria; Actinomycetota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella
Old locus tag
HMPREF9452_01855
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Genomic context

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NZ_JH126473.1Genomic Context describing neighboring genes Neighboring gene site-specific integrase Neighboring gene hypothetical protein Neighboring gene glutamine-hydrolyzing GMP synthase Neighboring gene asparaginase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_JH126473.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular evolution of helix-turn-helix proteins. Rosinski JA, et al. J Mol Evol, 1999 Sep. PMID 10473770

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
helix-turn-helix transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_JH126473.1 Reference assembly

    Range
    12090..12647
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_004010378.1 MULTISPECIES: helix-turn-helix transcriptional regulator [Terrabacteria group]

    See identical proteins and their annotated locations for WP_004010378.1

    UniProtKB/TrEMBL
    A0A0W7TLN9, A0A1C5ZFK1, A0A1C6KFY6, A0A1I5WDV8, A0A1Y3S772, A0A1Y3STH9, A0A1Y3XDJ5, A0A1Y4LPY0, A0A1Y4LRQ4, A0A1Y4S8X4, A0A1Y4WQE2, A0A414NUS0, A0A6N3ETY3, A0A6N7X4Z8, A0A7G9B2T9, A0A923I893, A0A943E4U1, A0A9X5YQY9, A0A9X8UIJ3, E6M199, G1WKJ2
    Conserved Domains (1) summary
    cd00093
    Location:4 → 61
    HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
Nucleotide Protein
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