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Oat-rs1 ornithine aminotransferase related sequence 1 [ Mus musculus (house mouse) ]

Gene ID: 635275, updated on 17-Aug-2024

Summary

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Official Symbol
Oat-rs1provided by MGI
Official Full Name
ornithine aminotransferase related sequence 1provided by MGI
Primary source
MGI:MGI:97395
See related
AllianceGenome:MGI:97395
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm7154; Gm16453; EG667523
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Genomic context

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See Oat-rs1 in Genome Data Viewer
Location:
X A7.3; X 38.3 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (74958704..74960447)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (75915098..75916841)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene plastin 3 (T-isoform) Neighboring gene STARR-seq mESC enhancer starr_47394 Neighboring gene predicted gene, 23320 Neighboring gene predicted gene, 21025 Neighboring gene lysyl-tRNA synthetase pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and expression of murine cDNAs encoding Xlr3a and Xlr3b, defining a new X-linked lymphocyte-regulated Xlr gene subfamily. Bergsagel PL, et al. Gene, 1994 Dec 15. PMID 7821804
  2. Mapping of ornithine aminotransferase gene sequences to mouse chromosomes 7, X, and 3. Ramesh V, et al. Mamm Genome, 1992. PMID 1349842
  3. Identification and genetic mapping of differentially expressed genes in mice differing at the If1 interferon regulatory locus. Kozak CA, et al. Mamm Genome, 1999 Sep. PMID 10441734
  4. Intracisternal A-type particle elements as genetic markers: detection by repeat element viral element amplified locus-PCR. Kaushik N, et al. Mamm Genome, 1994 Nov. PMID 7873878

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • ornithine aminotransferase pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_013094.1 

    Range
    101..1844
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    74958704..74960447
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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