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Gm16445 predicted pseudogene 16445 [ Mus musculus (house mouse) ]

Gene ID: 635580, updated on 27-Nov-2024

Summary

Official Symbol
Gm16445provided by MGI
Official Full Name
predicted pseudogene 16445provided by MGI
Primary source
MGI:MGI:3649081
See related
Ensembl:ENSMUSG00000127234 AllianceGenome:MGI:3649081
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG667285
Expression
Restricted expression toward testis adult (RPKM 10.9) See more
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Genomic context

See Gm16445 in Genome Data Viewer
Location:
X F3; X 72.38 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (152935567..152939883, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (154152571..154156887, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene spermatogenesis associated multipass transmembrane protein 1d Neighboring gene predicted pseudogene 5645 Neighboring gene predicted gene 6620 Neighboring gene high mobility group box 3 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
uncharacterized protein LOC635580

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001243032.1NP_001229961.1  uncharacterized protein LOC635580

    Status: VALIDATED

    Source sequence(s)
    BX005465
    Related
    ENSMUST00000280559.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    152935567..152939883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)