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Tex13c1 TEX13 family member C1 [ Mus musculus (house mouse) ]

Gene ID: 637093, updated on 9-Dec-2024

Summary

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Official Symbol
Tex13c1provided by MGI
Official Full Name
TEX13 family member C1provided by MGI
Primary source
MGI:MGI:2685208
See related
Ensembl:ENSMUSG00000078320 AllianceGenome:MGI:2685208
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm362; Tex13c
Summary
Predicted to enable mRNA binding activity. Orthologous to human TEX13C (TEX13 family member C). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Restricted expression toward testis adult (RPKM 5.6) See more
Orthologs
human all
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Genomic context

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See Tex13c1 in Genome Data Viewer
Location:
X A4; X 23.58 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (42679866..42682407)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (43590989..43593530)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene teneurin transmembrane protein 1 Neighboring gene predicted gene, 24763 Neighboring gene STARR-seq mESC enhancer starr_47072 Neighboring gene STARR-seq mESC enhancer starr_47073 Neighboring gene STARR-seq mESC enhancer starr_47075 Neighboring gene predicted gene 14579 Neighboring gene STARR-seq mESC enhancer starr_47076 Neighboring gene STARR-seq mESC enhancer starr_47077 Neighboring gene STARR-seq mESC enhancer starr_47078 Neighboring gene STARR-seq mESC enhancer starr_47079 Neighboring gene DDB1 and CUL4 associated factor 12-like 2 Neighboring gene crumbs homolog 1 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  

General protein information

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Preferred Names
testis-expressed protein 13C-1
Names
TEX13 family member C-1
testis-expressed protein 13C
testis-expressed sequence 13C protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195271.1 → NP_001182200.1  testis-expressed protein 13C-1

    Status: PROVISIONAL

    Source sequence(s)
    AL671890
    Consensus CDS
    CCDS72373.1
    UniProtKB/Swiss-Prot
    D3YU32
    Related
    ENSMUSP00000100745.3, ENSMUST00000105113.4
    Conserved Domains (1) summary
    pfam15186
    Location:5 → 148
    TEX13; Testis-expressed sequence 13 protein family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    42679866..42682407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
D3YU32.1 GenPept UniProtKB/Swiss-Prot:D3YU32

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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