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FAM138F family with sequence similarity 138 member F [ Homo sapiens (human) ]

Gene ID: 641702, updated on 10-Dec-2024

Summary

Official Symbol
FAM138Fprovided by HGNC
Official Full Name
family with sequence similarity 138 member Fprovided by HGNC
Primary source
HGNC:HGNC:33581
See related
Ensembl:ENSG00000282591 AllianceGenome:HGNC:33581
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
F379
Expression
Low expression observed in reference dataset See more
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Genomic context

See FAM138F in Genome Data Viewer
Location:
19p13.3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (76220..77690, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (27180..28650, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (76220..77690, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:62757-63376 Neighboring gene WASP family homolog 5, pseudogene Neighboring gene uncharacterized LOC105376912 Neighboring gene microRNA 1302-11 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:81877-82378 Neighboring gene olfactory receptor family 4 subfamily G member 3 pseudogene Neighboring gene olfactory receptor family 4 subfamily G member 1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_026820.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC008993
    Related
    ENST00000631376.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    76220..77690 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    27180..28650 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)