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I0K03_RS26535 radical SAM/SPASM domain-containing protein [ Bacillus toyonensis ]

Gene ID: 64186719, updated on 1-Dec-2024

Summary

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Gene symbol
I0K03_RS26535
Gene description
radical SAM/SPASM domain-containing protein
Locus tag
I0K03_RS26535
Gene type
protein coding
Organism
Bacillus toyonensis (strain: P18)
Lineage
Bacteria; Bacillati; Bacillota; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group
Old locus tag
I0K03_26535
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Genomic context

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NZ_CP064875.1Genomic Context describing neighboring genes Neighboring gene GMP reductase Neighboring gene oligoendopeptidase F Neighboring gene CxxH/CxxC protein Neighboring gene 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP064875.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SPASM and twitch domains in S-adenosylmethionine (SAM) radical enzymes. Grell TA, et al. J Biol Chem, 2015 Feb 13. PMID 25477505, Free PMC Article
  2. Self-sacrifice in radical S-adenosylmethionine proteins. Booker SJ, et al. Curr Opin Chem Biol, 2007 Oct. PMID 17936058, Free PMC Article
  3. The Radical SAM Superfamily. Frey PA, et al. Crit Rev Biochem Mol Biol, 2008 Jan-Feb. PMID 18307109
  4. Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods. Sofia HJ, et al. Nucleic Acids Res, 2001 Mar 1. PMID 11222759, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
radical SAM/SPASM domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP064875.1 Reference assembly

    Range
    5221032..5221910 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_000713626.1 MULTISPECIES: radical SAM/SPASM domain-containing protein [Bacillus]

    See identical proteins and their annotated locations for WP_000713626.1

    UniProtKB/TrEMBL
    A0A1D3PQW0, A0A1V6LGF7, A0A8I1GPU7, A0AAJ1P2V2
    Conserved Domains (2) summary
    COG0535
    Location:8 → 291
    SkfB; Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family [General function prediction only]
    cd21122
    Location:217 → 287
    SPASM_rSAM; Iron-sulfur cluster-binding SPASM domain of an uncharacterized group of radical SAM proteins
Nucleotide Protein
Heading Accession and Version