U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Y94H6A.12 peptidyl-tRNA hydrolase [ Caenorhabditis elegans ]

Gene ID: 6418689, updated on 4-Jan-2025

Summary

Go to the top of the page Help
Official Symbol
Y94H6A.12
Official Full Name
peptidyl-tRNA hydrolase
Primary source
WormBase:WBGene00050885
Locus tag
CELE_Y94H6A.12
See related
AllianceGenome:WB:WBGene00050885
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable aminoacyl-tRNA hydrolase activity. Orthologous to human PTRHD1 (peptidyl-tRNA hydrolase domain containing 1). [provided by Alliance of Genome Resources, Jan 2025]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Y94H6A.12 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (2711950..2713035, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene E2 ubiquitin-conjugating enzyme Neighboring gene Ulp1 protease family, C-terminal catalytic domain containing protein Neighboring gene Low molecular weight phosphotyrosine protein phosphatase Neighboring gene ncRNA Neighboring gene putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables aminoacyl-tRNA hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
peptidyl-tRNA hydrolase
NP_001122831.1
  • Confirmed by transcript evidence
NP_001368226.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    2711950..2713035 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001129359.3 → NP_001122831.1  peptidyl-tRNA hydrolase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001122831.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A7WK43
    Conserved Domains (1) summary
    cd02429
    Location:9 → 120
    PTH2_like; Peptidyl-tRNA hydrolase, type 2 (PTH2)_like . Peptidyl-tRNA hydrolase activity releases tRNA from the premature translation termination product peptidyl-tRNA. Two structurally different enzymes have been reported to encode such activity, Pth present in ...

  2. NM_001380104.1 → NP_001368226.1  peptidyl-tRNA hydrolase [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    U4PE54
    Conserved Domains (1) summary
    cl19212
    Location:1 → 60
    PTH2_family; Peptidyl-tRNA hydrolase, type 2 (PTH2)_like . Peptidyl-tRNA hydrolase activity releases tRNA from the premature translation termination product peptidyl-tRNA. Two structurally different enzymes have been reported to encode such activity, Pth present in ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools