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RPL23AP53 ribosomal protein L23a pseudogene 53 [ Homo sapiens (human) ]

Gene ID: 644128, updated on 17-Sep-2024

Summary

Official Symbol
RPL23AP53provided by HGNC
Official Full Name
ribosomal protein L23a pseudogene 53provided by HGNC
Primary source
HGNC:HGNC:35921
See related
AllianceGenome:HGNC:35921
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RPL23A_20_869
Expression
Ubiquitous expression in ovary (RPKM 3.1), testis (RPKM 2.9) and 25 other tissues See more
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Genomic context

See RPL23AP53 in Genome Data Viewer
Location:
8p23.3
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (208344..232318, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (5121..29123, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (158344..182318, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902051 Neighboring gene septin 14 pseudogene 8 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18876 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:157026-157248 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18877 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26938 Neighboring gene zinc finger protein 596 Neighboring gene uncharacterized LOC101927566 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26939 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26940 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26941 Neighboring gene uncharacterized LOC124902052

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_003572.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC131281, BC064938, DA238450

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    208344..232318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    5121..29123 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)