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GOT2P1 GOT2 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 645538, updated on 10-Dec-2024

Summary

Official Symbol
GOT2P1provided by HGNC
Official Full Name
GOT2 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:4434
See related
Ensembl:ENSG00000231900 AllianceGenome:HGNC:4434
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GOT2L1
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Genomic context

See GOT2P1 in Genome Data Viewer
Location:
1p32.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (55367465..55368774)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (55249978..55251287)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (55833138..55834447)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene MIR4422 host gene Neighboring gene glycogenin 1 pseudogene 3 Neighboring gene microRNA 4422 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:55705977-55706476 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 930 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:55789428-55789960 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:55800171-55800672 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:55800673-55801172 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1072 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:55810023-55810523 Neighboring gene RN7SK pseudogene 291 Neighboring gene MT-CO2 pseudogene 34

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
Electronic medical records and genomics (eMERGE) network exploration in cataract: Several new potential susceptibility loci.
EBI GWAS Catalog

General gene information

Other Names

  • glutamic-oxaloacetic transaminase 2 pseudogene 1
  • glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2) (GOT2) pseudogene
  • glutamic-oxaloacetic transaminase 2-like 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_008826.1 

    Range
    101..1410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    55367465..55368774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    55249978..55251287
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)