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UHO2_07197 uncharacterized protein [ Ustilago hordei ]

Gene ID: 64867617, updated on 30-Nov-2023

Summary

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Gene symbol
UHO2_07197
Gene description
uncharacterized protein
Locus tag
UHO2_07197
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ustilago hordei (strain: Uho2)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Ustilaginomycetes; Ustilaginales; Ustilaginaceae; Ustilago
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Genomic context

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See UHO2_07197 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_024545283.1Genomic Context describing neighboring genes Neighboring gene putative NADPH-cytochrome P450 reductase Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024545283.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein
XP_041414933.1
  • related to AGE2 - ADP-ribosylation factor and GTPase activating protein effector

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_024545283.1 Reference assembly

    Range
    298502..299721 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041558999.1 → XP_041414933.1  uncharacterized protein UHO2_07197 [Ustilago hordei]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    I2FNL8
    Conserved Domains (1) summary
    cd08839
    Location:18 → 118
    ArfGap_SMAP; Stromal membrane-associated proteins; a subfamily of the ArfGAP family
Nucleotide Protein
Heading Accession and Version