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TRIM60P14 tripartite motif containing 60 pseudogene 14 [ Homo sapiens (human) ]

Gene ID: 653794, updated on 10-Dec-2024

Summary

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Official Symbol
TRIM60P14provided by HGNC
Official Full Name
tripartite motif containing 60 pseudogene 14provided by HGNC
Primary source
HGNC:HGNC:38486
See related
Ensembl:ENSG00000250227 AllianceGenome:HGNC:38486
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See TRIM60P14 in Genome Data Viewer
Location:
4q32.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (164915566..164916980)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (168263243..168264657)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (165836718..165838132)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene small integral membrane protein 31 Neighboring gene RNA, U6 small nuclear 668, pseudogene Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:165720294-165720912 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:165720913-165721532 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:165794162-165794662 Neighboring gene apelin receptor early endogenous ligand Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22107 Neighboring gene ribosomal protein L26 pseudogene 16 Neighboring gene protein FAM218A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_022090.1 

    Range
    101..1515
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    164915566..164916980
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    168263243..168264657
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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