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Klra14-ps killer cell lectin-like receptor subfamily A, member 14, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 654449, updated on 17-Aug-2024

Summary

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Official Symbol
Klra14-psprovided by MGI
Official Full Name
killer cell lectin-like receptor subfamily A, member 14, pseudogeneprovided by MGI
Primary source
MGI:MGI:1321089
See related
Ensembl:ENSMUSG00000072721 AllianceGenome:MGI:1321089
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Ly49N; Klra14; Klra29; Klra31; Gm15858; EG654449
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Klra14-ps in Genome Data Viewer
Location:
6 63.44 cM; 6 F3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (130126069..130137711, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (130149106..130160748, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene killer cell lectin-like receptor, subfamily A, member 8 Neighboring gene predicted gene, 24712 Neighboring gene predicted gene, 23552 Neighboring gene killer cell lectin-like receptor subfamily A, member 9 Neighboring gene predicted gene, 52487

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Localization of five new Ly49 genes, including three closely related to Ly49c. McQueen KL, et al. Immunogenetics, 1998 Aug. PMID 9683662
  2. Ly49 receptors: evolution, genetic diversity, and impact on immunity. Rahim MM, et al. Immunol Rev, 2015 Sep. PMID 26284475
  3. Class I MHC-binding characteristics of the 129/J Ly49 repertoire. Makrigiannis AP, et al. J Immunol, 2001 Apr 15. PMID 11290784
  4. The ly49 gene family. A brief guide to the nomenclature, genetics, and role in intracellular infection. Schenkel AR, et al. Front Immunol, 2013. PMID 23596445, Free PMC Article
  5. Susceptibility to mouse cytomegalovirus is associated with deletion of an activating natural killer cell receptor of the C-type lectin superfamily. Lee SH, et al. Nat Genet, 2001 May. PMID 11326273

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Other Names

  • killer cell lectin-like receptor subfamily A member 29
  • killer cell lectin-like receptor subfamily A member 31
  • predicted pseudogene 15858

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104105.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC090127
    Related
    ENSMUST00000119532.3

  2. NR_104106.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) uses an alternate splice site in the 5' region and results in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AC090127

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    130126069..130137711 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001039117.1: Suppressed sequence

    Description
    NM_001039117.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.

  2. NM_001252149.1: Suppressed sequence

    Description
    NM_001252149.1: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.

  3. NM_008461.2: Suppressed sequence

    Description
    NM_008461.2: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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