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Appbp2os amyloid beta precursor protein binding protein 2, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 654810, updated on 22-Oct-2024

Summary

Official Symbol
Appbp2osprovided by MGI
Official Full Name
amyloid beta precursor protein binding protein 2, opposite strandprovided by MGI
Primary source
MGI:MGI:3603817
See related
Ensembl:ENSMUSG00000085628 AllianceGenome:MGI:3603817
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
D630032N06Rik
Expression
Ubiquitous expression in placenta adult (RPKM 1.3), testis adult (RPKM 1.2) and 25 other tissues See more
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Genomic context

See Appbp2os in Genome Data Viewer
Location:
11 C; 11 51.34 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (85125992..85129130)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (85235166..85238304)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 51947 Neighboring gene predicted gene, 38935 Neighboring gene STARR-seq mESC enhancer starr_30238 Neighboring gene amyloid beta precursor protein binding protein 2 Neighboring gene STARR-seq mESC enhancer starr_30241 Neighboring gene STARR-positive B cell enhancer ABC_E593 Neighboring gene STARR-positive B cell enhancer ABC_E303 Neighboring gene protein phosphatase 1D magnesium-dependent, delta isoform Neighboring gene BCAS3 microtubule associated cell migration factor Neighboring gene STARR-seq mESC enhancer starr_30248 Neighboring gene STARR-seq mESC enhancer starr_30251 Neighboring gene limb enhancer upstream of Tbx2 Neighboring gene BCAS3 microtubule associated cell migration factor, opposite strand 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Other Names

  • amyloid beta precursor protein (cytoplasmic tail) binding protein 2, opposite strand

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_028329.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK085477, AL596183, BQ033447
    Related
    ENSMUST00000136454.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    85125992..85129130
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)